Andrographis News

Geranylgerannylpyrophosphate synthase [Andrographis]

Saturday, November 25, 2006

NCBI Protein Sequence search on Andrographis resulted in many results, out of which one is detailed below:

 


 


LOCUS       CAJ00343                 140 aa            linear   PLN 14-NOV-2006
DEFINITION  putative geranylgerannylpyrophosphate synthase [Andrographis
            paniculata].
ACCESSION   CAJ00343
 VERSION     CAJ00343.1  GI:67008259
DBSOURCE    embl accession AJ973134.1
KEYWORDS    .
SOURCE      Andrographis paniculata
  ORGANISM   Andrographis paniculata
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; 
            asterids; lamiids; Lamiales; Acanthaceae; Acanthoideae; Ruellieae;
            Andrographinae; Andrographis.
REFERENCE   1
  AUTHORS   Maison,T., Volkaert,H., Boonprakob,U. and Paisooksantivatana,Y. 
  TITLE     Genetic diversity of Andrographis paniculata Wall. ex Nees as
            revealed by morphological and molecular markers
  JOURNAL   (misc) Kasetsart University Journal 39 (2005) In press
REFERENCE   2  (residues 1 to 140) 
  AUTHORS   Volkaert,H.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JUN-2005) Volkaert H.A., Kasetsart University -
            Kamphaengsaen Cam, Center for Agricultural Biotechnology,
            Kamphaengsaen, NakornPathom 73140, THAILAND 
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Andrographis paniculata"
                     /db_xref="taxon: 175694"
                     /tissue_type="leaf"
                     /country="Thailand"
      Protein         1..140
                     /product="putative geranylgerannylpyrophosphate synthase"
      Region          <1..>140
                     /region_name="Trans_IPPS_HT"
                     /note="Trans-Isoprenyl Diphosphate Synthases (Trans_IPPS),
                     head-to-tail (HT) (1'-4) condensation reactions; cd00685" 
                     /db_xref="CDD:58339"
      CDS             1..140
                     /gene="ggps"
                     /coded_by="AJ973134.1:<1..>421"
                     /note="locus 1"
                     /codon_start=2 
                     /db_xref="GOA:Q4VY92"
                     /db_xref="HSSP:Q83M58"
                     /db_xref="InterPro: IPR000092"
                     /db_xref="InterPro:IPR008949"
                     /db_xref="UniProtKB/TrEMBL: Q4VY92"
ORIGIN      
        1 lrrgrptnhk vfgedtavla gdallslafn hvaektknve hcrvvraiae lalaigsegl
       61 vagqivdlds egekislnel eyihvhktsm lleaaavcgg ilgggestev eslrkyarci 
      121 gllfqvvddi ldvtksseql
//

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